We no longer maintain the miRU server. Please try our next-generation plant small RNA target analysis server, psRNATarget.
miRU: Plant microRNA Potential Target Finder
The program predicts plant miRNA target genes. It reports all potential sequences complementary to the query with mismatches no more than specified for each mismatch type. In addition, each mismatch is penalized according to the mismatch type and position to the miRNA. With default settings, the minimal score among all 20mers cannot exceed 3.0. This program can also be used for siRNA specificity detection. For more information about the prediction algorithm and questions about the search result, please click here.
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